Orain
Claude connectorCommunityThe AI workbench for spatial multi-omics. Open whole-slide images, outline every cell, find tissue patterns across patient cohorts, and get…
- Tools
- 30
exposed by this connector
Movement
From our daily snapshots over the last 30 days.
Rank by popularity
Rank by trending score
Popularity score
Trending score
Movement is measured against our own daily snapshots, and there isn’t an earlier one to compare with yet.
In its categories
How this connector compares with others in the same category. Positions are counted within the category, not across the whole directory.
Health life sciencesnot ranked by popularity · not ranked by trending score
This connector isn’t ranked by popularity, so the category’s top connectors are shown instead.
| # | Connector | Popularity | Trending | 7d |
|---|---|---|---|---|
| 1 | 17,116 | 0 | ||
| 2 | 16,407 | 3places up | ||
| 3 | 14,533 | 1places down | ||
| 4 | 14,140 | 13places up | ||
| 5 |  Undermind | 13,815 | 12places up | |
| 6 |  SNOMED CT Terminology | 13,758 | 3places down | |
| 7 |  Cortellis CMC Intelligence | 13,533 | 0 |
This connector isn’t ranked by trending score, so the category’s top connectors are shown instead.
| # | Connector | Trending | Popularity | 7d |
|---|---|---|---|---|
| 1 |  Simma | 234,756 | — | |
| 2 | 148,436 | 58places up | ||
| 3 | 62,607 | — | ||
| 4 | 59,350 | 96places down | ||
| 5 | Undermind | 56,488 | 30places down | |
| 6 | 53,493 | 88places down | ||
| 7 |  Seqout | 50,211 | — |
Nonprofitnot ranked by popularity · not ranked by trending score
This connector isn’t ranked by popularity, so the category’s top connectors are shown instead.
| # | Connector | Popularity | Trending | 7d |
|---|---|---|---|---|
| 1 |  Salesforce - Beta | 18,983 | 1places up | |
| 2 | 17,346 | 2places down | ||
| 3 |  Candid | 13,539 | 14places down | |
| 4 | 13,037 | 10places down | ||
| 5 |  Jotform Apps | 12,779 | 8places down | |
| 6 | 12,043 | 10places down | ||
| 7 | 11,710 | 19places down |
This connector isn’t ranked by trending score, so the category’s top connectors are shown instead.
| # | Connector | Trending | Popularity | 7d |
|---|---|---|---|---|
| 1 |  Vaquill AI Primary Law. | 65,997 | 20places down | |
| 2 |  Jeroen.nl - Onafhankelijk energieplatform | 49,312 | — | |
| 3 | 48,080 | 72places down | ||
| 4 | 46,824 | 253places down | ||
| 5 | Salesforce - Beta | 45,085 | 51places down | |
| 6 |  Givebutter | 44,338 | 23places down | |
| 7 | Jotform Apps | 37,560 | 243places down |
Data analyticsnot ranked by popularity · not ranked by trending score
This connector isn’t ranked by popularity, so the category’s top connectors are shown instead.
| # | Connector | Popularity | Trending | 7d |
|---|---|---|---|---|
| 1 | 19,048 | 0 | ||
| 2 | Salesforce - Beta | 18,983 | 1places up | |
| 3 | 18,590 | 1places up | ||
| 4 | 18,195 | 1places up | ||
| 5 | 18,185 | 2places down | ||
| 6 | 18,111 | 0 | ||
| 7 |  vidIQ | 18,049 | 6places up |
This connector isn’t ranked by trending score, so the category’s top connectors are shown instead.
| # | Connector | Trending | Popularity | 7d |
|---|---|---|---|---|
| 1 |  Amazon Selling Partner | 27,940,082 | 1places up | |
| 2 | 4,603,696 | 18places up | ||
| 3 | 3,702,915 | 2places up | ||
| 4 |  Coinversa Pulse | 2,725,800 | 52places up | |
| 5 | 1,030,044 | 66places up | ||
| 6 | 762,405 | — | ||
| 7 |  Search1API | 560,539 | — |
Developer toolsnot ranked by popularity · not ranked by trending score
This connector isn’t ranked by popularity, so the category’s top connectors are shown instead.
This connector isn’t ranked by trending score, so the category’s top connectors are shown instead.
| # | Connector | Trending | Popularity | 7d |
|---|---|---|---|---|
| 1 | Coinversa Pulse | 2,725,800 | 52places up | |
| 2 | 762,405 | — | ||
| 3 | Search1API | 560,539 | — | |
| 4 |  api.wawesome.io | 538,389 | — | |
| 5 | 251,015 | — | ||
| 6 | 250,429 | — | ||
| 7 |  DomainKits | 183,005 | 57places up |
Orain stores your tissue data (H&E and IHC whole-slide images, multiplex imaging such as CODEX/PhenoCycler, IMC and mIF, and spatial transcriptomics such as Visium, Xenium and CosMx) and runs the pipelines on its own GPUs, so Claude never has to move a multi-gigabyte slide.
From a conversation you can:
- Bring data in: upload a file, ingest any public URL, or pull open-access TCGA/CPTAC slides from NCI GDC.
- Open a slide in an interactive viewer and get a link to it.
- Outline every nucleus, measure tissue versus airspace, and name each tissue piece or TMA core.
- Compute patch embeddings and discover spatial tissue patterns that separate two groups of patients, such as responders versus non-responders or KRAS versus STK11.
- Ask an analysis question. Orain's own analyst works in your project and returns an answer and a written, reviewed report.
- Share a read-only link that a collaborator can open without logging in.
Every result has a page in Orain where you can see it on the slide.
You need an Orain account. Storage, rented compute and analyst questions are charged at cost from your workspace credit, and new workspaces start with free credit.
Tools
- annotate_tissue_pieces
- ask_orain
- cancel_run
- cell_segmentation_stardist
- check_wsi_discover_readiness
- create_project
- delete_project
- fs_read
- fs_search
- generate_signature_report
- get_orain_answer
- get_quota
- get_run
- get_started
- ingest_url_to_project
- list_cbioportal_studies
- list_project_files
- list_project_results
Show all 30Show fewer
- list_projects
- query_cbioportal_mutations
- queue_gdc_download
- queue_gdc_downloads
- run_wsi_embedding
- search_gdc_slides
- segment_tissue_on_slide
- share_project
- signature_discovery_cohort
- upload_file_to_project
- wait_for_downloads
- wsi_viewer
- Made by
- OrainBio, Inc. · Website
- Sign-in
- Required
- Connector URL
- https://mcp.orainbio.com/mcp
- Transport
- Streamable HTTP
- Works with
- Claude, Claude API, Claude Code, Claude Desktop
- Added
- October 4, 2026
- More info