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Seqout

Claude connectorCommunity

Search and discover genomic datasets across GEO, SRA, ENA, DRA, GEA, GSA & ArrayExpress

View in Claude directory
Tools
109

exposed by this connector

Movement

From our daily snapshots over the last 30 days.

Rank by popularity

#2902of 3,75752places down24h—7d
#2,845#2,861#2,877#2,893Sep 3Sep 9Sep 15Sep 21Sep 27Oct 2

Rank by trending score

#1771of 2,074130places up24h—7d
#1,758#1,797#1,836#1,875#1,914Sep 3Sep 9Sep 15Sep 21Sep 27Oct 2

Popularity score

4,170+26324h—7d
3,8813,9604,0394,118Sep 3Sep 9Sep 15Sep 21Sep 27Oct 2

Trending score

19,620+4,77124h—7d
14,37215,80417,23618,668Sep 3Sep 9Sep 15Sep 21Sep 27Oct 2

In its categories

How this connector compares with others in the same category. Positions are counted within the category, not across the whole directory.

Health life sciences45th of 58 by popularity · 25th of 32 by trending score
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All 59 Health life sciences connectors

Data analytics1,083rd of 1,421 by popularity · 618th of 775 by trending score
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Seqout lets you search, discover and access datasets from GEO, SRA, ENA, DRA, GEA, GSA & ArrayExpress. Seqout harmonises sample metadata, publication details and offers read-derived metadata such as bacterial or viral content in samples, genetic sex and species.

Tools

  • bulk_project_samples_metadata
  • classify_accession
  • convert_accession
  • convert_accessions
  • download_pentimento_detections_csv
  • download_study_script
  • download_supplementary_script
  • find_geo_series_samples
  • find_publication
  • find_study_experiments
  • find_study_runs
  • get_ae_experiment_samples
  • get_common_name_by_scientific_name
  • get_common_names_by_scientific_names
  • get_country_accessions
  • get_country_facets
  • get_country_pis
  • get_country_points
Show all 109
  • get_country_projects
  • get_country_summary
  • get_disease_aliases
  • get_disease_facets
  • get_disease_projects
  • get_disease_summary
  • get_enriched_column
  • get_enriched_coverage
  • get_enriched_crosstab
  • get_enriched_stats
  • get_experiment
  • get_experiment_enriched
  • get_experiment_metadata_rows
  • get_experiment_runs
  • get_geo_series_samples
  • get_global_contribution_filters
  • get_global_contributions
  • get_growth_stats
  • get_last_updated
  • get_longread_facets
  • get_longread_projects
  • get_longread_summary
  • get_organism_growth
  • get_organism_totals
  • get_pentimento_overview
  • get_perturbation_facets
  • get_perturbation_projects
  • get_perturbation_summary
  • get_platform_filters
  • get_platform_growth
  • get_platform_instruments
  • get_platform_totals
  • get_project
  • get_project_cite
  • get_project_enriched
  • get_project_longread_chemistry
  • get_project_metadata
  • get_project_metadata_rows
  • get_project_overlap
  • get_project_similar
  • get_project_single_cell
  • get_project_single_cell_status
  • get_project_single_cell_summary
  • get_project_xref
  • get_run
  • get_run_checksums
  • get_run_enriched
  • get_run_metadata_rows
  • get_sample
  • get_sample_detail
  • get_sample_experiments
  • get_sc_quality
  • get_sc_quality_samples
  • get_search_investigators
  • get_single_cell_overview
  • get_singlecell_facets
  • get_singlecell_projects
  • get_singlecell_summary
  • get_source_totals
  • get_spatial_facets
  • get_spatial_projects
  • get_spatial_summary
  • get_study_bams
  • get_study_download_manifest
  • get_study_experiments
  • get_study_runs
  • get_study_samples
  • get_supplementary_files
  • get_tissue_facets
  • get_tissue_microbes
  • get_tissue_projects
  • get_tissue_summary
  • list_centers
  • list_instrument_models
  • list_journals
  • list_library_strategies
  • list_single_cell_studies
  • ontology_term
  • resolve_accession_project
  • resolve_prj_project
  • resolve_submission_studies
  • search_all
  • search_author_projects
  • search_by_author
  • search_enriched_samples
  • search_expansion
  • search_highlight
  • search_nl
  • search_organisms
  • search_structured
  • search_suggest
Categories
Made by
Saket Lab · Website
Sign-in
Not required
Connector URL
https://seqout.org/api/mcp
Transport
Streamable HTTP
Works with
Claude, Claude API, Claude Code, Claude Desktop
Added
September 26, 2026
More info