Slide Viewer
ChatGPT pluginExplore whole-slide microscopy, digital pathology, and spatial transcriptomics.
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Rank in Scientific research
7 listing changes logged · latest Oct 8: Version. See what changed
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Scientific research15th of 31 by placement
| # | Plugin | Position | 7d |
|---|---|---|---|
| 13 | #2540 | 187places up | |
| 14 | #2892 | 2,317places up | |
| 15 | #2984 | 43places down | |
| 16 | #3043 | 1,935places up | |
| 17 | #3283 | 225places down |
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Explore real tissue images and spatial measurements in one research workspace. Open compatible SVS, TIFF, DICOM, OME-Zarr or AnnData sources; navigate image pyramids, compare registered gene expression, inspect cells and molecules, adjust microscopy channels, and edit annotated regions. Use source-backed scientific workflows and single-user projects while preserving the original specimen. UI actions have typed agent counterparts; availability depends on the source and host. Read current selections and annotations on demand, and capture the current viewport or a source region for image interpretation. Research use, not clinical diagnosis.
Example prompts
- “Download OpenSlide’s full CMU-1 brightfield slide (132.6 MB), open it, and ask me to draw a region before inspecting tissue.”
- “Download Squidpy’s H&E mouse-brain crop, open its registered tissue image, and inspect the real spot and gene counts.”
- “Download Squidpy’s fluorescence mouse-brain crop and compare Slc17a7/Gad1 over its registered tissue preview, if present.”
Skills
slide-viewer
Open and control whole-slide microscopy, supported DICOM/OME-Zarr and spatial AnnData sources; inspect live state, registered molecular layers, single-user projects and bounded source-backed research workflows.
- Categories
- Sign-in
- On Install
- Capabilities
- Interactive, Read, Write
- Availability
- Available
- Version
- 0.1.67
- Keywords
- slide, pathology, histology, histopathology, digital-pathology, microscopy, svs, tif, tiff, dicom, ome-tiff, ome-zarr, ngff, aperio, h5ad, anndata, spatial-transcriptomics, spatial-omics, spatial-biology, gene-expression, spatial-gene-expression, visium, 10x-genomics, segmentation, annotations, overlays, clusters, spatial-domains, geojson, cellvit, tissue, tissue-architecture, whole-slide, whole-slide-imaging, wsi, region-of-interest, viewer
- Created
- August 6, 2026
- More info
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